Publications

Peer-Reviewed Journal and Conference Papers

TACO screenshot

Christina Niederer, Holger Stitz, Reem Hourieh, Florian Grassinger, Wolfgang Aigner, Marc Streit
TACO: Visualizing Changes in Tables Over Time
IEEE Transactions on Visualization and Computer Graphics (InfoVis '17), 2017 (to appear).

Interactive Clustering screenshot

Michael Kern, Alexander Lex, Nils Gehlenborg, Chris R. Johnson
Interactive Visual Exploration And Refinement Of Cluster Assignments
BMC Bioinformatics, to appear, 2017.

Pathfinder screenshot

Christian Partl, Samuel Gratzl, Marc Streit, Anne Mai Wassermann, Hanspeter Pfister, Dieter Schmalstieg, Alexander Lex
Pathfinder: Visual Analysis of Paths in Graphs
Computer Graphics Forum (EuroVis '16), vol. 35, no. 3, pp. 71-80, 2016.

CLUE screenshot

Samuel Gratzl, Alexander Lex, Nils Gehlenborg, Nicola Cosgrove, Marc Streit
From Visual Exploration to Storytelling and Back Again
Computer Graphics Forum (EuroVis '16), vol. 35, no. 3, pp. 491-500, 2016.

AVOCADO screenshot

Holger Stitz, Stefan Luger, Marc Streit, Nils Gehlenborg
AVOCADO: Visualization of Workflow-Derived Data Provenance for Reproducible Biomedical Research
Computer Graphics Forum (EuroVis '16), vol. 35, no. 3, pp. 481-490, 2016.

Vials screenshot

Hendrik Strobelt, Bilal Alsallakh, Joseph Botors, Brant Peterson, Mark Borowsky, Hanspeter Pfister, Alexander Lex
Vials: Visualizing Alternative Splicing of Genes
IEEE Transactions on Visualization and Computer Graphics (InfoVis ’15), vol. 22, no. 1, pp. 399-408, 2016.

Contour screenshot

Christian Partl, Alexander Lex, Hendrik Strobelt, Anne Mai Wassermann, Hanspeter Pfister, Dieter Schmalstieg
ConTour: Data-Driven Exploration of Multi-Relational Datasets for Drug Discovery
IEEE Transactions on Visualization and Computer Graphics (VAST '14), 20(12), pp. 1883-1892, 2014.

UpSet screenshot

Alexander Lex, Nils Gehlenborg, Hendrik Strobelt, Romain Vuillemot, Hanspeter Pfister
UpSet: Visualization of Intersecting Sets
IEEE Transactions on Visualization and Computer Graphics (InfoVis '14), vol. 20, no. 12, pp. 1983–1992, 2014.

Domino screenshot

Samuel Gratzl, Nils Gehlenborg, Alexander Lex, Hanspeter Pfister, Marc Streit
Domino: Extracting, Comparing, and Manipulating Subsets across Multiple Tabular Datasets
IEEE Transactions on Visualization and Computer Graphics (InfoVis '14), 20(12), pp. 2023-2032, 2014.

Hidden-Content screenshot

Thomas Geymayer, Markus Steinberger, Alexander Lex, Marc Streit, Dieter Schmalstieg
Show me the Invisible: Visualizing Hidden Content
Proceedings of the SIGCHI Conference on Human Factors in Computing Systems (CHI ’14), pp. 3705-3714, 2014.

furby screenshot

Marc Streit, Samuel Gratzl, Michael Gillhofer, Andreas Mayr, Andreas Mitterecker, Sepp Hochreiter
Furby: Fuzzy Force-Directed Bicluster Visualization
BMC Bioinformatics, 15(Suppl 6), p. S4, 2014.

LineUp screenshot

Samuel Gratzl, Alexander Lex, Nils Gehlenborg, Hanspeter Pfister, Marc Streit
LineUp: Visual Analysis of Multi-Attribute Rankings
IEEE Transactions on Visualization and Computer Graphics (InfoVis '13), 19(12), pp. 2277–2286, 2013.

Entourage screenshot

Alexander Lex, Christian Partl, Denis Kalkofen, Marc Streit, Anne Mai Wassermann, Samuel Gratzl, Dieter Schmalstieg, Hanspeter Pfister
Entourage: Visualizing Relationships between Biological Pathways using Contextual Subsets
IEEE Transactions on Visualization and Computer Graphics (InfoVis '13), 19(12), pp. 2536–2545, 2013.

enRoute screenshot

Clemens Holzhüter, Alexander Lex, Dieter Schmalstieg, Hans-Jörg Schulz, Heidrun Schumann, Marc Streit
Visualizing Uncertainty in Biological Expression Data
Proceedings of the SPIE Conference on Visualization and Data Analysis (VDA '12), pp. 82940O, 2012.

LineUp screenshot

Marc Streit, Hans-Jörg Schulz, Alexander Lex, Dieter Schmalstieg, Heidrun Schumann
Model-Driven Design for the Visual Analysis of Heterogeneous Data
IEEE Transactions on Visualization and Computer Graphics, 18(6), pp. 998-1010, 2012.

enRoute screenshot

Christian Partl, Alexander Lex, Marc Streit, Denis Kalkofen, Karl Kashofer, Dieter Schmalstieg
enRoute: Dynamic Path Extraction from Biological Pathway Maps for In-Depth Experimental Data Analysis
Proceedings of the IEEE Symposium on Biological Data Visualization (BioVis ’12), pp. 107–114, 2012.

VisBricks screenshot

Thomas Geymayer, Alexander Lex, Marc Streit, Dieter Schmalstieg
Visualizing the Effects of Logically Combined Filters
Proceedings of the Conference on Information Visualisation (IV ’2011), pp. 47-52, 2011.

VisBricks screenshot

Alexander Lex, Hans-Jörg Schulz, Marc Streit, Christian Partl, Dieter Schmalstieg
VisBricks: Multiform Visualization of Large, Inhomogeneous Data
IEEE Transactions on Visualization and Computer Graphics (InfoVis '11), 17(12), pp. 2291-2300, 2011.

VisBricks screenshot

Alexander Lex, Marc Streit, Ernst Kruijff, Dieter Schmalstieg
Caleydo: Design and Evaluation of a Visual Analysis Framework for Gene Expression Data in its Biological Context
Proceedings of IEEE Pacific Visualization Symposium (PacificVis '10), pp. 57-64, 2010.

Matchmaker screenshot

Alexander Lex, Marc Streit, Christian Partl, Karl Kashofer, Dieter Schmalstieg
Comparative Analysis of Multidimensional, Quantitative Data
IEEE Transactions on Visualization and Computer Graphics (InfoVis '2010), 16(6), pp. 1027-1035, 2010.

 screenshot

Heimo Müller, Robert Reihs, Stefan Sauer, Kurt Zatloukal, Marc Streit, Alexander Lex, Bernhard Schlegl, Dieter Schmalstieg
Connecting Genes with Diseases
Proceedings of the Conference on Information Visualisation (IV ’2009), 2009.

 screenshot

Marc Streit, Alexander Lex, Heimo Müller, Dieter Schmalstieg
Gaze-Based Focus Adaption in an Information Visualization System
Proceedings of the Conference on Computer Graphics and Visualization and Image Processing (CGVCVIP '09), 2009.

 screenshot

Marc Streit, Alexander Lex, Michael Kalkusch, Kurt Zatloukal, Dieter Schmalstieg
Caleydo: Connecting Pathways with Gene Expression
Bioinformatics, Oxford Journals, 25(20), pp. 2760-2761, 2009.

Jukebox screenshot

Marc Streit, Michael Kalkusch, Karl Kashofer, Dieter Schmalstieg
Navigation and Exploration of Interconnected Pathways
Computer Graphics Forum (EuroVis '08), 27(3), pp. 951-958, 2008.


Theses

Thesis-Streit screenshot

Marc Streit
Guided Visual Analysis of Heterogeneous Data
Graz University of Technology, PhD Thesis, March 2011


Extended Abstracts and Posters

Holger Stitz, Samuel Gratzl, Harald Piringer, Marc Streit
Provenance-Based Visualization Retrieval
IEEE Conference on Visual Analytics Science and Technology (VAST ’17), Phoenix, AZ, USA, 2017.


Katarina Furmanova, Miroslava Jaresova, Bikram Kawan, Holger Stitz, Martin Ennemoser, Samuel Gratzl, Alexander Lex, Marc Streit
Taggle: Scaling Table Visualization through Aggregation
IEEE Conference on Information Visualization (InfoVis ’17), Phoenix, AZ, USA, 2017.


Reem Hourieh, Holger Stitz, Nils Gehlenborg, Marc Streit
TaCo: Comparative Visualization of Large Tabular Data
Poster Compendium of the Eurographics/IEEE Symposium on Visualization (EuroVis ’16), Groningen, Netherlands, 2016.


Holger Stitz, Samuel Gratzl, Harald Rogner, Marc Streit
Visual Evaluation of Cloud Infrastructure Performance Predictions
IEEE Conference on Information Visualization (InfoVis ’16), Baltimore, MD, USA, 2016.


Stefan Luger, Holger Stitz, Samuel Gratzl, Nils Gehlenborg, Marc Streit
Interactive Visualization of Provenance Graphs for Reproducible Biomedical Research
IEEE Conference on Information Visualization (InfoVis ’15), Chicago, IL, USA, 2015.


Holger Stitz, Samuel Gratzl, Wolfgang Aigner, Marc Streit
ThermalPlot: Visualizing Multi-Attribute Time-Series Data Using a Thermal Metaphor
IEEE Conference on Information Visualization (InfoVis ’15), Chicago, IL, USA, 2015.


Samuel Gratzl, Nils Gehlenborg, Alexander Lex, Hendrik Strobelt, Christian Partl, Marc Streit
Caleydo Web: An Integrated Visual Analysis Platform for Biomedical Data
IEEE Conference on Information Visualization (InfoVis ’15), Chicago, IL, USA, 2015.


Holger Stitz, Samuel Gratzl, Stefan Luger, Nils Gehlenborg, Marc Streit
Transparent Layering for Visualizing Dynamic Graphs Using the Flip Book Metaphor
IEEE Conference on Information Visualization (InfoVis ’14), Paris, France, 2014.


Christian Partl, Alexander Lex, Marc Streit, Hendrik Strobelt, Anne-Mai Wassermann, Hanspeter Pfister, Dieter Schmalstieg
ConTour: Data-Driven Exploration of Multi-Relational Datasets for Drug Discovery
Symposium on Biological Data Visualization (BioVis '14), ISMB, Boston, MA, USA, 2014.


Nils Gehlenborg, Richard Park, Ilya Sytchev, Psalm Haseley, Stefan Luger, Anton Xue, Marc Streit, Shannan Ho Sui, Winston Hide, Peter J. Park
Refinery Platform: A Foundation for Integrative Data Visualization Tools
Symposium on Biological Data Visualization (BioVis '14), ISMB, Boston, MA, USA, 2014.


Hans-Jörg Schulz, Marc Streit, Thorsten May, Christian Tominski
Towards a Characterization of Guidance in Visualization
IEEE Conference on Information Visualization (InfoVis ’13), Atlanta, GA, USA, 2013.


Marc Streit, Alexander Lex, Christian Partl, Dieter Schmalstieg, Peter J. Park, Nils Gehlenborg
StratomeX: Guided Visual Exploration for Tumor Subtype Identification in The Cancer Genome Atlas
The Cancer Genome Atlas' 2nd Annual Scientific Symposium, Crystal City, VA, USA, 2012.


Alexander Lex, Marc Streit, Hans-Jörg Schulz, Christian Partl, Dieter Schmalstieg, Peter J. Park, Nils Gehlenborg
StratomeX: Enabling Visualization-Driven Cancer Subtype Analysis
IEEE Symposium on Biological Data Visualization (BioVis '12), Seattle, WA, USA, 2012.


Marc Streit, Alexander Lex, Hans-Jörg Schulz, Christian Partl, Dieter Schmalstieg, Peter J. Park, Nils Gehlenborg
Guided Visual Analysis for the Identification of Cancer Subtypes
The Cancer Genome Atlas’ Semi-Annual Steering Committee Meeting, Houston, TX, US, 2012.


Alexander Lex, Marc Streit, Hans-Jörg Schulz, Christian Partl, Dieter Schmalstieg, Peter J. Park, Nils Gehlenborg
StratomeX - Integrative Visualization of Tumor Subtypes in Cancer Genomics Data Sets
EMBO Workshop on Visualizing Biological Data (VIZBI '12), Heidelberg, Germany, 2012.


Marc Streit, Alexander Lex, Helmut Doleischakea, Dieter Schmalstieg
Does Software Engineering Pay Off for Research? Lessons Learned from the Caleydo Project
Eurographics Workshop on Visual Computing for Biomedicine (VCBM '10), Leipzig, Germany, 2010.


Gudrun Schmidt-Gann, Katharina Schmid, Monika Uehlein, Joachim Struck, Andreas Bergmann, Dieter Schmalstieg, Marc Streit, Alexander Lex, Douw G. van der Nest, Martijn van Griensven, Heinz Redl
Gene- and Protein Expression Profiling in Liver in a Sepsis-Baboon Model
Conference on SHOCK, 31, 4-4, San Antonio, Texas, USA, 2009.

Marc Streit, Alexander Lex, Dieter Schmalstieg, Heimo Müller, Stefan Sauer, Wilhelm Steiner, Kurt Zatloukal
CALEYDO
ZMF.Day (Center for Medical Research), Graz, Austria, 2008.


Manuela Waldner, Christian Pirchheim, Marc Streit, Dieter Schmalstieg
Multiple View Visualization On A Multi Display Setup
International Workshop on Giga-Pixel Displays & Visual Analytics (GIANT '08), Leeds, UK, 2008.


Marc Streit, Michael Kalkusch, Dieter Schmalstieg
Interactive Visualization of Metabolic Pathways
IEEE Conference on Visualization (Vis '07), Sacramento, CA, USA, 2007.